* WIP: new workflow architecture
* WIP: further improvements and cleanup
* WIP: cleanup and docks, replace old tool with new
* WIP: cleanup and docks, replace old tool with new
* WIP: new planner implementation using workflow
* WIP: precommit tool working as a workflow instead of a basic tool
Support for passing False to use_assistant_model to skip external models completely and use Claude only
* WIP: precommit workflow version swapped with old
* WIP: codereview
* WIP: replaced codereview
* WIP: replaced codereview
* WIP: replaced refactor
* WIP: workflow for thinkdeep
* WIP: ensure files get embedded correctly
* WIP: thinkdeep replaced with workflow version
* WIP: improved messaging when an external model's response is received
* WIP: analyze tool swapped
* WIP: updated tests
* Extract only the content when building history
* Use "relevant_files" for workflow tools only
* WIP: updated tests
* Extract only the content when building history
* Use "relevant_files" for workflow tools only
* WIP: fixed get_completion_next_steps_message missing param
* Fixed tests
Request for files consistently
* Fixed tests
Request for files consistently
* Fixed tests
* New testgen workflow tool
Updated docs
* Swap testgen workflow
* Fix CI test failures by excluding API-dependent tests
- Update GitHub Actions workflow to exclude simulation tests that require API keys
- Fix collaboration tests to properly mock workflow tool expert analysis calls
- Update test assertions to handle new workflow tool response format
- Ensure unit tests run without external API dependencies in CI
🤖 Generated with [Claude Code](https://claude.ai/code)
Co-Authored-By: Claude <noreply@anthropic.com>
* WIP - Update tests to match new tools
* WIP - Update tests to match new tools
* WIP - Update tests to match new tools
* Should help with https://github.com/BeehiveInnovations/zen-mcp-server/issues/97
Clear python cache when running script: https://github.com/BeehiveInnovations/zen-mcp-server/issues/96
Improved retry error logging
Cleanup
* WIP - chat tool using new architecture and improved code sharing
* Removed todo
* Removed todo
* Cleanup old name
* Tweak wordings
* Tweak wordings
Migrate old tests
* Support for Flash 2.0 and Flash Lite 2.0
* Support for Flash 2.0 and Flash Lite 2.0
* Support for Flash 2.0 and Flash Lite 2.0
Fixed test
* Improved consensus to use the workflow base class
* Improved consensus to use the workflow base class
* Allow images
* Allow images
* Replaced old consensus tool
* Cleanup tests
* Tests for prompt size
* New tool: docgen
Tests for prompt size
Fixes: https://github.com/BeehiveInnovations/zen-mcp-server/issues/107
Use available token size limits: https://github.com/BeehiveInnovations/zen-mcp-server/issues/105
* Improved docgen prompt
Exclude TestGen from pytest inclusion
* Updated errors
* Lint
* DocGen instructed not to fix bugs, surface them and stick to d
* WIP
* Stop claude from being lazy and only documenting a small handful
* More style rules
---------
Co-authored-by: Claude <noreply@anthropic.com>
* WIP: new workflow architecture
* WIP: further improvements and cleanup
* WIP: cleanup and docks, replace old tool with new
* WIP: cleanup and docks, replace old tool with new
* WIP: new planner implementation using workflow
* WIP: precommit tool working as a workflow instead of a basic tool
Support for passing False to use_assistant_model to skip external models completely and use Claude only
* WIP: precommit workflow version swapped with old
* WIP: codereview
* WIP: replaced codereview
* WIP: replaced codereview
* WIP: replaced refactor
* WIP: workflow for thinkdeep
* WIP: ensure files get embedded correctly
* WIP: thinkdeep replaced with workflow version
* WIP: improved messaging when an external model's response is received
* WIP: analyze tool swapped
* WIP: updated tests
* Extract only the content when building history
* Use "relevant_files" for workflow tools only
* WIP: updated tests
* Extract only the content when building history
* Use "relevant_files" for workflow tools only
* WIP: fixed get_completion_next_steps_message missing param
* Fixed tests
Request for files consistently
* Fixed tests
Request for files consistently
* Fixed tests
* New testgen workflow tool
Updated docs
* Swap testgen workflow
* Fix CI test failures by excluding API-dependent tests
- Update GitHub Actions workflow to exclude simulation tests that require API keys
- Fix collaboration tests to properly mock workflow tool expert analysis calls
- Update test assertions to handle new workflow tool response format
- Ensure unit tests run without external API dependencies in CI
🤖 Generated with [Claude Code](https://claude.ai/code)
Co-Authored-By: Claude <noreply@anthropic.com>
* WIP - Update tests to match new tools
* WIP - Update tests to match new tools
---------
Co-authored-by: Claude <noreply@anthropic.com>
* Migration from docker to standalone server
Migration handling
Fixed tests
Use simpler in-memory storage
Support for concurrent logging to disk
Simplified direct connections to localhost
* Migration from docker / redis to standalone script
Updated tests
Updated run script
Fixed requirements
Use dotenv
Ask if user would like to install MCP in Claude Desktop once
Updated docs
* More cleanup and references to docker removed
* Cleanup
* Comments
* Fixed tests
* Fix GitHub Actions workflow for standalone Python architecture
- Install requirements-dev.txt for pytest and testing dependencies
- Remove Docker setup from simulation tests (now standalone)
- Simplify linting job to use requirements-dev.txt
- Update simulation tests to run directly without Docker
Fixes unit test failures in CI due to missing pytest dependency.
🤖 Generated with [Claude Code](https://claude.ai/code)
Co-Authored-By: Claude <noreply@anthropic.com>
* Remove simulation tests from GitHub Actions
- Removed simulation-tests job that makes real API calls
- Keep only unit tests (mocked, no API costs) and linting
- Simulation tests should be run manually with real API keys
- Reduces CI costs and complexity
GitHub Actions now only runs:
- Unit tests (569 tests, all mocked)
- Code quality checks (ruff, black)
🤖 Generated with [Claude Code](https://claude.ai/code)
Co-Authored-By: Claude <noreply@anthropic.com>
* Fixed tests
* Fixed tests
---------
Co-authored-by: Claude <noreply@anthropic.com>
* WIP
Refactor resolving mode_names, should be done once at MCP call boundary
Pass around model context instead
Consensus tool allows one to get a consensus from multiple models, optionally assigning one a 'for' or 'against' stance to find nuanced responses.
* Deduplication of model resolution, model_context should be available before reaching deeper parts of the code
Improved abstraction when building conversations
Throw programmer errors early
* Guardrails
Support for `model:option` format at MCP boundary so future tools can use additional options if needed instead of handling this only for consensus
Model name now supports an optional ":option" for future use
* Simplified async flow
* Improved model for request to support natural language
Simplified async flow
* Improved model for request to support natural language
Simplified async flow
* Fix consensus tool async/sync patterns to match codebase standards
CRITICAL FIXES:
- Converted _get_consensus_responses from async to sync (matches other tools)
- Converted store_conversation_turn from async to sync (add_turn is synchronous)
- Removed unnecessary asyncio imports and sleep calls
- Fixed ClosedResourceError in MCP protocol during long consensus operations
PATTERN ALIGNMENT:
- Consensus tool now follows same sync patterns as all other tools
- Only execute() and prepare_prompt() are async (base class requirement)
- All internal operations are synchronous like analyze, chat, debug, etc.
TESTING:
- MCP simulation test now passes: consensus_stance ✅
- Two-model consensus works correctly in ~35 seconds
- Unknown stance handling defaults to neutral with warnings
- All 9 unit tests pass (100% success rate)
The consensus tool async patterns were anomalous in the codebase.
This fix aligns it with the established synchronous patterns used
by all other tools while maintaining full functionality.
🤖 Generated with [Claude Code](https://claude.ai/code)
Co-Authored-By: Claude <noreply@anthropic.com>
* Fixed call order and added new test
* Cleanup dead comments
Docs for the new tool
Improved tests
---------
Co-authored-by: Claude <noreply@anthropic.com>
New tool to list all models `listmodels`
Integration test to for all the different combinations of API keys
Tweaks to codereview prompt for a better quality input from Claude
Fixed missing 'low' severity in codereview
Fixed MagicMock comparison errors across multiple test suites by:
- Adding proper ModelCapabilities mocks with real values instead of MagicMock objects
- Updating test_auto_mode.py with correct provider mocking for model availability tests
- Updating test_thinking_modes.py with proper capabilities mocking in all thinking mode tests
- Updating test_tools.py with proper capabilities mocking for CodeReview and Analyze tools
- Fixing test_large_prompt_handling.py by adding proper provider mocking to prevent errors before large prompt detection
Fixed pytest collection warnings by:
- Renaming TestGenRequest to TestGenerationRequest to avoid pytest collecting it as a test class
- Renaming TestGenTool to TestGenerationTool to avoid pytest collecting it as a test class
- Updated all imports and references across server.py, tools/__init__.py, and test files
All 459 tests now pass without warnings or MagicMock comparison errors.
🤖 Generated with [Claude Code](https://claude.ai/code)
Co-Authored-By: Claude <noreply@anthropic.com>
Docs added to show how a new tool is created
All tools should add numbers to code for models to be able to reference if needed
Enabled line numbering for code for all tools to use
Additional tests to validate line numbering is not added to git diffs
Supports decomposing large components and files, finding codesmells, finding modernizing opportunities as well as code organization opportunities. Fix this mega-classes today!
Line numbers added to embedded code for better references from model -> claude
Improved testgen; encourages follow-ups with less work in between and less token generation to avoid surpassing the 25K barrier
Improved coderevew tool to request a focused code review instead where a single-pass code review is too large or complex
* Support for Custom URLs and custom models, including locally hosted models such as ollama
* Support for native + openrouter + local models (i.e. dozens of models) means you can start delegating sub-tasks to particular models or work to local models such as localizations or other boring work etc.
* Several tests added
* precommit to also include untracked (new) files
* Logfile auto rollover
* Improved logging
Simulation tests to confirm threading and history traversal
Chain of communication and branching validation tests from live simulation
Temperature enforcement per model
## Major Features Added
### 🎯 Dynamic Configuration System
- **Environment-aware model selection**: DEFAULT_MODEL with 'pro'/'flash' shortcuts
- **Configurable thinking modes**: DEFAULT_THINKING_MODE_THINKDEEP for extended reasoning
- **All tool schemas now dynamic**: Show actual current defaults instead of hardcoded values
- **Enhanced setup workflow**: Copy from .env.example with smart customization
### 🔧 Model & Thinking Configuration
- **Smart model resolution**: Support both shortcuts ('pro', 'flash') and full model names
- **Thinking mode optimization**: Only apply thinking budget to models that support it
- **Flash model compatibility**: Works without thinking config, still beneficial via system prompts
- **Dynamic schema descriptions**: Tool parameters show current environment values
### 🚀 Enhanced Developer Experience
- **Fail-fast Docker setup**: GEMINI_API_KEY required upfront in docker-compose
- **Comprehensive startup logging**: Shows current model and thinking mode defaults
- **Enhanced get_version tool**: Reports all dynamic configuration values
- **Better .env documentation**: Clear token consumption details and model options
### 🧪 Comprehensive Testing
- **Live model validation**: New simulator test validates Pro vs Flash thinking behavior
- **Dynamic configuration tests**: Verify environment variable overrides work correctly
- **Complete test coverage**: All 139 unit tests pass, including new model config tests
### 📋 Configuration Files Updated
- **docker-compose.yml**: Fail-fast API key validation, thinking mode support
- **setup-docker.sh**: Copy from .env.example instead of manual creation
- **.env.example**: Detailed documentation with token consumption per thinking mode
- **.gitignore**: Added test-setup/ for cleanup
### 🛠 Technical Improvements
- **Removed setup.py**: Fully Docker-based deployment (no longer needed)
- **REDIS_URL smart defaults**: Auto-configured for Docker, still configurable for dev
- **All tools updated**: Consistent dynamic model parameter descriptions
- **Enhanced error handling**: Better model resolution and validation
## Breaking Changes
- Removed setup.py (Docker-only deployment)
- Model parameter descriptions now show actual defaults (dynamic)
## Migration Guide
- Update .env files using new .env.example format
- Use 'pro'/'flash' shortcuts or full model names
- Set DEFAULT_THINKING_MODE_THINKDEEP for custom thinking depth
🤖 Generated with [Claude Code](https://claude.ai/code)
Co-Authored-By: Claude <noreply@anthropic.com>
This commit addresses several critical issues and improvements:
🔧 Critical Fixes:
- Fixed conversation history not being included when using continuation_id in AI-to-AI conversations
- Fixed test mock targeting issues preventing proper conversation memory validation
- Fixed Docker debug logging functionality with Gemini tools
🐛 Bug Fixes:
- Docker compose configuration for proper container command execution
- Test mock import targeting from utils.conversation_memory.* to tools.base.*
- Version bump to 3.1.0 reflecting significant improvements
🚀 Improvements:
- Enhanced Docker environment configuration with comprehensive logging setup
- Added cross-tool continuation documentation and examples in README
- Improved error handling and validation across all tools
- Better logging configuration with LOG_LEVEL environment variable support
- Enhanced conversation memory system documentation
🧪 Testing:
- Added comprehensive conversation history bug fix tests
- Added cross-tool continuation functionality tests
- All 132 tests now pass with proper conversation history validation
- Improved test coverage for AI-to-AI conversation threading
✨ Code Quality:
- Applied black, isort, and ruff formatting across entire codebase
- Enhanced inline documentation for conversation memory system
- Cleaned up temporary files and improved repository hygiene
- Better test descriptions and coverage for critical functionality
🤖 Generated with [Claude Code](https://claude.ai/code)
Co-Authored-By: Claude <noreply@anthropic.com>
Remove Windows batch scripts and native setup instructions since Claude Code CLI
requires WSL on Windows. Consolidate Docker as primary recommendation across all platforms.
Changes:
- Remove setup.bat, run_gemini.bat, setup-docker-env.bat
- Remove examples/claude_config_windows.json
- Update README to clarify WSL requirement for Windows users
- Promote Docker as recommended setup for all platforms
- Update troubleshooting section for WSL-only support
- Apply code formatting fixes from ruff/black
🤖 Generated with [Claude Code](https://claude.ai/code)
Co-Authored-By: Claude <noreply@anthropic.com>
- Fixed code formatting in server.py using black
- Only formatting changes, no functional modifications
- Ensures consistent code style across the project
All tests pass (96/96) and linting is clean:
- ✅ pytest: 96 tests passed
- ✅ ruff: all checks passed
- ✅ black: formatting applied
- ✅ isort: import sorting correct
🤖 Generated with [Claude Code](https://claude.ai/code)
Co-Authored-By: Claude <noreply@anthropic.com>
- Replaced plain dict capabilities with proper ServerCapabilities object
- Added proper imports for ServerCapabilities and ToolsCapability from mcp.types
- Now correctly declares tools capability using ToolsCapability() instead of empty dict
- This follows the MCP protocol specification for server capability declaration
The previous implementation used {"tools": {}} which was not the correct way
to declare tool capabilities according to the MCP Python SDK. This fix ensures
proper capability negotiation during MCP client connection initialization.
🤖 Generated with [Claude Code](https://claude.ai/code)
Co-Authored-By: Claude <noreply@anthropic.com>
