Renamed setup script to avoid confusion (https://github.com/BeehiveInnovations/zen-mcp-server/issues/35)

Further fixes to tests
Pass O3 simulation test when keys are not set, along with a notice
Updated docs on testing, simulation tests / contributing
Support for OpenAI o4-mini and o4-mini-high

examples/claude_config_macos.json

@@ -1,7 +1,7 @@
 {
   "comment": "macOS configuration using Docker",
   "comment2": "Ensure Docker is running and containers are started",
-  "comment3": "Run './setup-docker.sh' first to set up the environment",
+  "comment3": "Run './run-server.sh' first to set up the environment",
   "mcpServers": {
     "zen": {
       "command": "docker",

examples/claude_config_wsl.json

@@ -1,7 +1,7 @@
 {
   "comment": "Windows configuration using WSL with Docker",
   "comment2": "Ensure Docker Desktop is running and WSL integration is enabled",
-  "comment3": "Run './setup-docker.sh' in WSL first to set up the environment",
+  "comment3": "Run './run-server.sh' in WSL first to set up the environment",
   "mcpServers": {
     "zen": {
       "command": "wsl.exe",